CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL009073
(
Aedes aegypti
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
AAEL009073
T22649_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL009073-PA
La
587
644
IKKQIEYYFSEDNLKRDFYLRRKMDPEGFLPVTLIASFHRVQALTADLNIIITAIQES
Links
Other
La
family RBPs
Other
Aedes aegypti
RBPs
53 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AGAP005291
Anopheles gambiae
AGAP005291
N
0.862
CPIJ001096
Culex quinquefasciatus
CPIJ001096
N
0.862
CpipJ_CPIJ001096
Culex pipiens
CpipJ_CPIJ001096
N
0.862
GI24848
Drosophila mojavensis
FBgn0147568
N
0.759
nasonia_NCBI_hmm577234
Nasonia vitripennis
nasonia_NCBI_hmm577234
N
0.750
GE10516
Drosophila yakuba
FBgn0228374
N
0.741
GG12072
Drosophila erecta
FBgn0104364
N
0.741
GH13999
Drosophila grimshawi
FBgn0121475
N
0.741
FBgn0261618
Drosophila melanogaster
FBgn0261618
N
0.741
GF16129
Drosophila ananassae
FBgn0093151
N
0.741
GL23866
Drosophila persimilis
FBgn0161456
N
0.724
GA27083-RA
Drosophila pseudoobscura
FBgn0248454
N
0.724
GJ24490
Drosophila virilis
FBgn0211570
N
0.724
GK22522
Drosophila willistoni
FBgn0224499
N
0.724
LARP1
Taeniopygia guttata
ENSTGUG00000000704
N
0.717
LARP1
Meleagris gallopavo
ENSMGAG00000005696
N
0.717
LARP1
Tarsius syrichta
ENSTSYG00000013732
N
0.717
LARP1
Gallus gallus
ENSGALG00000004001
N
0.717
LARP1
Anolis carolinensis
ENSACAG00000004071
N
0.717
amel4_ncbi_hmm3629
Apis mellifera
amel4_ncbi_hmm3629
N
0.707
LARP1
Spermophilus tridecemlineatus
ENSSTOG00000005678
N
0.700
LARP1
Sus scrofa
ENSSSCG00000017069
N
0.700
Larp1
Rattus norvegicus
ENSRNOG00000031544
N
0.700
LARP1B
Takifugu rubripes
ENSTRUG00000005612
N
0.700
Ame_R005086
Ailuropoda melanoleuca
Ame_R005086
N
0.700
larp1
Xenopus tropicalis
ENSXETG00000008413
N
0.700
LARP1
Tursiops truncatus
ENSTTRG00000015934
N
0.700
AAH93491
Xenopus laevis
AAH93491
N
0.700
LARP1
Pteropus vampyrus
ENSPVAG00000002262
N
0.700
LARP1
Ochotona princeps
ENSOPRG00000013014
N
0.700
Larp1
Dipodomys ordii
ENSDORG00000002897
N
0.700
LARP1
Equus caballus
ENSECAG00000017002
N
0.700
LARP1
Echinops telfairi
ENSETEG00000020251
N
0.700
LARP1
Felis catus
ENSFCAG00000000592
N
0.700
LARP1
Dasypus novemcinctus
ENSDNOG00000012073
N
0.700
larp1
Danio rerio
ENSDARG00000018434
N
0.700
LARP1
Bos taurus
ENSBTAG00000008443
N
0.700
LARP1
Canis familiaris
ENSCAFG00000017639
N
0.700
LOC100393482
Callithrix jacchus
ENSCJAG00000004454
N
0.700
LARP1
Cavia porcellus
ENSCPOG00000003377
N
0.700
LARP1
Homo sapiens
ENSG00000155506
N
0.700
ENSGGOG00000006048
Gorilla gorilla
ENSGGOG00000006048
N
0.700
LARP1
Ornithorhynchus anatinus
ENSOANG00000005096
N
0.700
LARP1
Oryctolagus cuniculus
ENSOCUG00000013066
N
0.700
LARP1
Otolemur garnettii
ENSOGAG00000016750
N
0.700
LARP1
Procavia capensis
ENSPCAG00000006407
N
0.700
Larp1
Mus musculus
ENSMUSG00000037331
N
0.700
LARP1
Macaca mulatta
ENSMMUG00000009411
N
0.700
ENSGGOG00000024102
Gorilla gorilla
ENSGGOG00000024102
N
0.700
LARP1
Loxodonta africana
ENSLAFG00000008991
N
0.700
LARP1
Microcebus murinus
ENSMICG00000000837
N
0.700
LARP1
Myotis lucifugus
ENSMLUG00000002608
N
0.700
LARP1
Pan troglodytes
ENSPTRG00000017447
N
0.700