CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GE10516
(
Drosophila yakuba
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
FBgn0228374
T22925_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0255526
La
456
513
IKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES
Links
Other
La
family RBPs
Other
Drosophila yakuba
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GG12072
Drosophila erecta
FBgn0104364
N
1.000
FBgn0261618
Drosophila melanogaster
FBgn0261618
N
1.000
GF16129
Drosophila ananassae
FBgn0093151
N
0.948
GI24848
Drosophila mojavensis
FBgn0147568
N
0.948
GA27083-RA
Drosophila pseudoobscura
FBgn0248454
N
0.948
GJ24490
Drosophila virilis
FBgn0211570
N
0.948
GL23866
Drosophila persimilis
FBgn0161456
N
0.948
GH13999
Drosophila grimshawi
FBgn0121475
N
0.931
GK22522
Drosophila willistoni
FBgn0224499
N
0.897
AGAP005291
Anopheles gambiae
AGAP005291
N
0.741
AAEL009073
Aedes aegypti
AAEL009073
N
0.741
LARP1
Ornithorhynchus anatinus
ENSOANG00000005096
N
0.717
larp1
Xenopus tropicalis
ENSXETG00000008413
N
0.700
nasonia_NCBI_hmm577234
Nasonia vitripennis
nasonia_NCBI_hmm577234
N
0.700
LARP1
Anolis carolinensis
ENSACAG00000004071
N
0.700