CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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A7TFA8_VANPO
(
Vanderwaltozyma polyspora
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
A7TFA8_VANPO
T23127_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
A7TFA8
La
204
263
VAAQVEYYFSEENLSKDTFLKSKMSKNGLVPLSLISQFYRVVNMSFGGDHNLILAAAREI
Links
Other
La
family RBPs
Other
Vanderwaltozyma polyspora
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
2293_YCL037C
Saccharomyces paradoxus
2293_YCL037C
N
0.750
SRO9
Saccharomyces cerevisiae
YCL037C
N
0.750
2160_YCL037C
Saccharomyces mikatae
2160_YCL037C
N
0.733
Skud_Contig2072.8
Saccharomyces kudriavzevii
Skud_Contig2072.8
N
0.733
2468_Multiple
Saccharomyces bayanus
2468_Multiple
N
0.717
Scas_Contig579.3
Saccharomyces castellii
Scas_Contig579.3
N
0.717
A7TFF0_VANPO
Vanderwaltozyma polyspora
A7TFF0_VANPO
N
0.717
CAGL0F00627g
Candida glabrata
CAGL0F00627g
N
0.700