SNRNP70 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000017158 T40247_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SNRNP70
M068_0.6 		Homo sapiens RWUCAAG RNAcompete
Ray et al.(2013)
RNCMPT00070 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000021468 RRM 105 170

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SNRNP70 Gasterosteus aculeatus ENSGACG00000000448 I 0.761
snrnp70 Danio rerio ENSDARG00000077126 I 0.761
LOC100392779 Callithrix jacchus ENSCJAG00000000193 I 0.758
Snrnp70 Mus musculus ENSMUSG00000063511 I 0.758
SNRNP70 Homo sapiens ENSG00000104852 D 0.758
SNRNP70 Pan troglodytes ENSPTRG00000011277 I 0.758
Snrnp70 Rattus norvegicus ENSRNOG00000020763 I 0.758
SNRNP70 Anolis carolinensis ENSACAG00000013276 I 0.746
SNRNP70 Takifugu rubripes ENSTRUG00000009202 I 0.746
LOC100054907 Equus caballus ENSECAG00000013936 I 0.742
SNRNP70 Felis catus ENSFCAG00000006683 I 0.742
SNRNP70 Macaca mulatta ENSMMUG00000004928 I 0.742
SNRNP70 Ornithorhynchus anatinus ENSOANG00000005213 I 0.742
snrnp70 Xenopus tropicalis ENSXETG00000022919 I 0.732
SNRNP70 Oryctolagus cuniculus ENSOCUG00000015081 I 0.718
SNRNP70 Myotis lucifugus ENSMLUG00000011766 I 0.718
SNRNP70 Gorilla gorilla ENSGGOG00000008245 I 0.718
SNRNP70 Loxodonta africana ENSLAFG00000028536 I 0.718
Snrnp70 Dipodomys ordii ENSDORG00000010228 I 0.718
Ame_R005855 Ailuropoda melanoleuca Ame_R005855 I 0.718
SNRNP70 Tursiops truncatus ENSTTRG00000017099 I 0.718
SNRNP70 Spermophilus tridecemlineatus ENSSTOG00000013988 I 0.718
RU17_BOVIN Bos taurus ENSBTAG00000001996 I 0.718
SNRNP70 Canis familiaris ENSCAFG00000003711 I 0.718
ENSPPYG00000010234 Pongo pygmaeus ENSPPYG00000010234 I 0.718
SNRNP70 Cavia porcellus ENSCPOG00000019589 I 0.718
SNRNP70 Erinaceus europaeus ENSEEUG00000005666 I 0.718