CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
FVEG_02619
(
Fusarium verticillioides
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
FVEG_02619
T59912_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FVEG_02619T0
S1
1097
1166
CEGMIVPINVRVVKDDFAIVKLDCGIEGRIEGHEINHRSSIKDALASGQTTQAKILDINYKDFMAKLSMR
Links
Other
S1
family RBPs
Other
Fusarium verticillioides
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FOXG_05520
Fusarium oxysporum
FOXG_05520
N
0.957
FGSG_09904
Fusarium graminearum
FGSG_09904
N
0.873
estExt_Genewise1.C_90896
Trichoderma virens
estExt_Genewise1.C_90896
N
0.817
e_gw1.5.1025.1
Nectria haematococca
e_gw1.5.1025.1
N
0.803
e_gw1.1.40.1
Trichoderma atroviride
e_gw1.1.40.1
N
0.789
e_gw1.4.4.1
Trichoderma reesei
e_gw1.4.4.1
N
0.775
estExt_Genewise1.C_33759
Myceliophthora thermophila
estExt_Genewise1.C_33759
N
0.775
genemark.2690_g
Thielavia terrestris
genemark.2690_g
N
0.746
Pa_2_830
Podospora anserina
Pa_2_830
N
0.732