ENSAMEG00000004776 (Ailuropoda melanoleuca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSAMEG00000004776 T076723_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
ENSAMEG00000004776
M01141_2.00		 Ailuropoda melanoleuca NGWGUAGW JPLE
Sasse et al.(2025)
RM_Ail.mel_ENSAMEG00000004776 		0.008

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M00630_2.00 		Homo sapiens GUGGGUCUCGK HTR-SELEX
Jolma et al.(2020)
0.930
RBM28
M00629_2.00 		Homo sapiens KRGGYYGWGCGGUGG HTR-SELEX
Jolma et al.(2020)
0.930
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
0.930
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.008
(85.88%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000005077 RRM 3 82
ENSAMEP00000005077 RRM 175 257
ENSAMEP00000005077 RRM 382 471
ENSAMEP00000005077 RRM 534 625

RNA contacting residues

Links

Other RRM family RBPs
Other Ailuropoda melanoleuca RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
WUBG_05017 Wuchereria bancrofti WUBG_05017 N 0.000
Bm3152 Brugia malayi Bm3152 N 0.000
LOAG_06033 Loa loa LOAG_06033 N 0.000
WBGene00237031 Onchocerca volvulus WBGene00237031 N 0.000
EEL_0000182501 Elaeophora elaphi EEL_0000182501 N 0.000
nAv.1.0.1.g05997 Acanthocheilonema viteae nAv.1.0.1.g05997 N 0.000
nDi.2.2.2.g02728 Dirofilaria immitis nDi.2.2.2.g02728 N 0.000
nLs.2.1.2.g04935 Litomosoides sigmodontis nLs.2.1.2.g04935 N 0.000
nOo.2.0.1.g09131 Onchocerca ochengi nOo.2.0.1.g09131 N 0.000
OFLC_0000636001 Onchocerca flexuosa OFLC_0000636001 N 0.000