RBM28 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSG00000106344 T080423_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
RBM28
M00069_2.00		 Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		(Direct)
RBM28
M00629_2.00		 Homo sapiens KRGGYYGWGCGGUGG HTR-SELEX
Jolma et al.(2020)
RBM28_linear_1 		(Direct)
RBM28
M00630_2.00		 Homo sapiens GUGGGUCUCGK HTR-SELEX
Jolma et al.(2020)
RBM28_linear_2 		(Direct)
RBM28
M13000_2.00		 Homo sapiens NGWGUAGW JPLE
Sasse et al.(2025)
RM_Hom.sap_ENSG00000106344 		0.005

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.005
(87.80%)

Experimental Constructs

Motif ID Domain From To Sequence
M00069_2.00 RRM 3 82
M00069_2.00 RRM 111 193
M00069_2.00 RRM 332 421
M00069_2.00 RRM 485 575

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000223073 RRM 3 82
ENSP00000223073 RRM 111 193
ENSP00000223073 RRM 332 421
ENSP00000223073 RRM 485 575
ENSP00000390517 RRM 3 45
ENSP00000390517 RRM 191 280
ENSP00000390517 RRM 344 434
ENSP00000418071 RRM 3 82
ENSP00000418071 RRM 111 155
ENSP00000419840 RRM 138 184
ENSP00000420503 RRM 3 50
ENSP00000420503 RRM 66 116
ENSP00000420503 RRM 145 204

RNA contacting residues

Links

Other RRM family RBPs
Other Homo sapiens RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM28 Pan troglodytes ENSPTRG00000019659 I 1.000
ENSPPYG00000017975 Pongo abelii ENSPPYG00000017975 I 0.997
ENSNLEG00000012307 Nomascus leucogenys ENSNLEG00000012307 I 0.994
ENSCSAG00000010161 Chlorocebus sabaeus ENSCSAG00000010161 I 0.983
ENSPANG00000022295 Papio anubis ENSPANG00000022295 I 0.977
ENSP00000223073 Macaca fascicularis ENSP00000223073 I 0.949
ENSMPUG00000006511 Mustela putorius furo ENSMPUG00000006511 I 0.939
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.937
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.936
RBM28 Equus caballus ENSECAG00000007745 I 0.934
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.931
ENSAMEG00000004776 Ailuropoda melanoleuca ENSAMEG00000004776 I 0.930
RBM28 Canis familiaris ENSCAFG00000001667 I 0.930
RBM28 Felis catus ENSFCAG00000000946 I 0.930
ENSSTOG00000002169 Ictidomys tridecemlineatus ENSSTOG00000002169 I 0.928
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.928
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.928
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.924
Rbm28 Mus musculus ENSMUSG00000029701 I 0.905
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.905
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.902
Myotis_brandtii_RBM28_10012817 Myotis brandtii Myotis_brandtii_RBM28_10012817 I 0.895
RBM28 Otolemur garnettii ENSOGAG00000006011 I 0.895
ENSOARG00000002547 Ovis aries ENSOARG00000002547 I 0.883
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.882
RBM28 Bos taurus ENSBTAG00000017001 I 0.875
ENSP00000223073-D1 Bos grunniens ENSP00000223073-D1 I 0.872
RBM28 Microcebus murinus ENSMICG00000000107 I 0.870
RBM28 Echinops telfairi ENSETEG00000007130 I 0.870
RBM28 Sorex araneus ENSSARG00000008303 I 0.863
RBM28 Gorilla gorilla ENSGGOG00000004644 I 0.858
ENSTSYG00000002892 Tarsius syrichta ENSTSYG00000002892 I 0.766
ENSMEUG00000009611 Macropus eugenii ENSMEUG00000009611 I 0.764
ENSSHAG00000017017 Sarcophilus harrisii ENSSHAG00000017017 I 0.764
RBM28 Erinaceus europaeus ENSEEUG00000002389 I 0.728
rbm28 Xenopus tropicalis XB-GENE-919947 I 0.719