Medtr5g008940 (Medicago truncatula)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		Medtr5g008940 T01029_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr5g008940.1 CCCH ZF 235 260
Medtr5g008940.1 RRM 378 438

Links

Other CCCH ZF,RRM family RBPs
Other Medicago truncatula RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R007258 Ailuropoda melanoleuca Ame_R007258 I 0.000
Q2KJ17_BOVIN Bos taurus ENSBTAG00000014041 I 0.000
G3BP2 Canis familiaris ENSCAFG00000008371 I 0.000
G3BP2 Choloepus hoffmanni ENSCHOG00000005346 I 0.000
LOC100413275 Callithrix jacchus ENSCJAG00000019897 I 0.000
G3BP2 Cavia porcellus ENSCPOG00000012052 I 0.000
G3bp2 Dipodomys ordii ENSDORG00000004825 I 0.000
G3BP2 Equus caballus ENSECAG00000007917 I 0.000
G3BP2 Erinaceus europaeus ENSEEUG00000013436 I 0.000
G3BP2 Felis catus ENSFCAG00000010124 I 0.000
G3BP2 Homo sapiens ENSG00000138757 D 0.000
G3BP2 Gorilla gorilla ENSGGOG00000014947 I 0.000
G3BP2 Loxodonta africana ENSLAFG00000023321 I 0.000
G3BP2 Microcebus murinus ENSMICG00000007795 I 0.000
G3BP2 Myotis lucifugus ENSMLUG00000004753 I 0.000
G3BP2 Macaca mulatta ENSMMUG00000002153 I 0.000
G3bp2 Mus musculus ENSMUSG00000029405 I 0.000
G3BP2 Oryctolagus cuniculus ENSOCUG00000003262 I 0.000
G3BP2 Otolemur garnettii ENSOGAG00000000157 I 0.000
G3BP2 Ochotona princeps ENSOPRG00000006307 I 0.000
G3BP2 Procavia capensis ENSPCAG00000015109 I 0.000
ENSPPYG00000014846 Pongo pygmaeus ENSPPYG00000014846 I 0.000
G3BP2 Pan troglodytes ENSPTRG00000016175 I 0.000
G3BP2 Pteropus vampyrus ENSPVAG00000010166 I 0.000
G3bp2 Rattus norvegicus ENSRNOG00000002433 I 0.000
G3BP2 Sorex araneus ENSSARG00000009503 I 0.000
G3BP2 Spermophilus tridecemlineatus ENSSTOG00000012975 N 0.000
ENSTBEG00000012323 Tupaia belangeri ENSTBEG00000012323 I 0.000
G3BP2 Vicugna pacos ENSVPAG00000010710 I 0.000