CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H18
(
Meleagris gallopavo
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSMGAG00000007631
T02845_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000007783
CCCH ZF
213
236
PRPTCRFFMKGHCTWGMNCRFIHP
Links
Other
CCCH ZF
family RBPs
Other
Meleagris gallopavo
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGTG_05616
Puccinia graminis
PGTG_05616
N
0.000
PGTG_12401
Puccinia graminis
PGTG_12401
N
0.000
PGTG_13717
Puccinia graminis
PGTG_13717
N
0.000
PGTG_18334
Puccinia graminis
PGTG_18334
N
0.000
PGTG_20157
Puccinia graminis
PGTG_20157
N
0.000
PGTG_20533
Puccinia graminis
PGTG_20533
N
0.000