Zc3h10 (Rattus norvegicus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSRNOG00000040281 T03337_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZC3H10
M083_0.6 		Homo sapiens SSAGCGM RNAcompete
Ray et al.(2013)
RNCMPT00085 		0.986
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000058705 CCCH ZF 39 62
ENSRNOP00000058705 CCCH ZF 79 98
ENSRNOP00000058705 CCCH ZF 135 160

Links

Other CCCH ZF family RBPs
Other Rattus norvegicus RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH73459 Xenopus laevis AAH73459 I 0.857
AAI27425 Xenopus laevis AAI27425 I 0.857
Ame_R003830 Ailuropoda melanoleuca Ame_R003830 I 0.986
ZC3H10 Anolis carolinensis ENSACAG00000005020 I 0.873
A5D7H8_BOVIN Bos taurus ENSBTAG00000009542 I 0.986
ZC3H10 Canis familiaris ENSCAFG00000000104 I 0.986
LOC100410117 Callithrix jacchus ENSCJAG00000011803 I 0.986
ZC3H10 Cavia porcellus ENSCPOG00000002916 I 0.986
ZC3H10 Dasypus novemcinctus ENSDNOG00000000333 I 0.986
Zc3h10 Dipodomys ordii ENSDORG00000001081 I 0.986
LOC100059294 Equus caballus ENSECAG00000013003 I 0.986
ZC3H10 Homo sapiens ENSG00000135482 D 0.986
ZC3H10 Loxodonta africana ENSLAFG00000014817 I 0.986
ZC3H10 Macropus eugenii ENSMEUG00000001222 I 0.971
ZC3H10 Macaca mulatta ENSMMUG00000021084 I 0.986
Zc3h10 Mus musculus ENSMUSG00000039810 I 0.986
ZC3H10 Oryctolagus cuniculus ENSOCUG00000017349 I 0.986
ZC3H10 Procavia capensis ENSPCAG00000005636 I 0.986
ENSPPYG00000004644 Pongo pygmaeus ENSPPYG00000004644 I 0.986
ZC3H10 Pan troglodytes ENSPTRG00000005078 I 0.986
ZC3H10 Pteropus vampyrus ENSPVAG00000007566 I 0.986
ZC3H10 Sorex araneus ENSSARG00000007208 I 0.986
ZC3H10 Sus scrofa ENSSSCG00000000378 I 0.986
ZC3H10 Spermophilus tridecemlineatus ENSSTOG00000007753 I 0.986
ZC3H10 Tursiops truncatus ENSTTRG00000016415 I 0.986
ZC3H10 Vicugna pacos ENSVPAG00000009524 I 0.986
zc3h10 Xenopus tropicalis ENSXETG00000009476 I 0.843