CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KLLA0C13673g
(
Kluyveromyces lactis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
KLLA0C13673g
T06239_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLLA0C13673g
CCCH ZF
87
112
PKTVLCALFKIGNCNKGARCKFSHDM
Links
Other
CCCH ZF
family RBPs
Other
Kluyveromyces lactis
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A7TLF2_VANPO
Vanderwaltozyma polyspora
A7TLF2_VANPO
N
0.769
AB07703.1
Alternaria brassicicola
AB07703.1
N
0.731
ACL082W
Ashbya gossypii
ACL082W
N
0.885
ARB_01723
Arthroderma benhamiae
ARB_01723
N
0.731
BDBG_01641
Blastomyces dermatitidis
BDBG_01641
N
0.731
ACLA_016930
Aspergillus clavatus
CADACLAG00000891
N
0.731
ATEG_06133
Aspergillus terreus
CADATEAG00002525
N
0.731
CAGL0J08679g
Candida glabrata
CAGL0J08679g
N
0.846
CC1G_07829
Coprinopsis cinerea
CC1G_07829
N
0.731
ENSCING00000006888
Ciona intestinalis
ENSCING00000006888
N
0.731
estExt_Genewise1.C_30385
Mucor circinelloides
estExt_Genewise1.C_30385
N
0.731
estExt_Genewise1.C_60471
Cochliobolus heterostrophus C5
estExt_Genewise1.C_60471
N
0.731
e_gw1.2.668.1
Sporobolomyces roseus
e_gw1.2.668.1
N
0.731
e_gw1.8.939.1
Pleurotus ostreatus
e_gw1.8.939.1
N
0.731
gwh2.4.391.1
Phanerochaete chrysosporium
gwh2.4.391.1
N
0.731
HCAG_08348
Histoplasma capsulatum
HCAG_08348
N
0.731
KLTH0G08162g
Kluyveromyces thermotolerans
KLTH0G08162g
N
0.923
Kwal_2969
Kluyveromyces waltii
Kwal_2969
N
0.885
MCYG_02954
Microsporum canis
MCYG_02954
N
0.731
MGG_07010
Magnaporthe oryzae
MGG_07010
N
0.731
MGYG_00125
Microsporum gypseum
MGYG_00125
N
0.731
Pa_3_8730
Podospora anserina
Pa_3_8730
N
0.731
PITG_04608
Phytophthora infestans
PITG_04608
N
0.731
SAKL0E09966g
Lachancea kluyveri
SAKL0E09966g
N
0.923
Scas_Contig578.9
Saccharomyces castellii
Scas_Contig578.9
N
0.808
s_451242
Phytophthora sojae
s_451242
N
0.731
TEQG_08385
Trichophyton equinum
TEQG_08385
N
0.731
TERG_01412
Trichophyton rubrum
TERG_01412
N
0.731
TESG_03135
Trichophyton tonsurans
TESG_03135
N
0.731
TRV_03417
Trichophyton verrucosum
TRV_03417
N
0.731