PMAA_009150 (Penicillium marneffei)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PMAA_009150 T06490_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_009150.t1 CCCH ZF 233 259
PMAA_009150.t1 CCCH ZF 260 284
PMAA_009150.t1 CCCH ZF 290 313
PMAA_009150.t1 CCCH ZF 316 337
PMAA_009150.t1 CCCH ZF 343 359

Links

Other CCCH ZF family RBPs
Other Penicillium marneffei RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BDBG_04175 Blastomyces dermatitidis BDBG_04175 N 0.714
ACLA_058900 Aspergillus clavatus CADACLAG00005693 N 0.758
AFLA_078470 Aspergillus flavus CADAFLAG00000629 N 0.748
AFUA_8G05480 Aspergillus fumigatus CADAFUAG00003004 N 0.733
ANIA_01537 Aspergillus nidulans CADANIAG00008164 N 0.783
ATEG_07738 Aspergillus terreus CADATEAG00000271 N 0.748
NFIA_098210 Neosartorya fischeri CADNFIAG00009091 N 0.742
HCAG_02832 Histoplasma capsulatum HCAG_02832 N 0.723
Pc12g03020 Penicillium chrysogenum Pc12g03020 N 0.717
TEQG_05649 Trichophyton equinum TEQG_05649 N 0.737
TERG_05591 Trichophyton rubrum TERG_05591 N 0.746
TESG_01626 Trichophyton tonsurans TESG_01626 N 0.737
UREG_02689 Uncinocarpus reesii UREG_02689 N 0.754