AAM77750 (Xenopus laevis)
CCHC ZF,CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00313 (CSD) 		IPR001878
IPR002059 		AAM77750 T06915_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
LIN28A
M153_0.6 		Homo sapiens YGGAGGR RNAcompete
Ray et al.(2013)
RNCMPT00162 		0.809
LIN28A
M035_0.6 		Homo sapiens HGGAGWA RNAcompete
Ray et al.(2013)
RNCMPT00036 		0.809
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAM77750 CSD 33 106
AAM77750 CCHC ZF 131 148
AAM77750 CCHC ZF 153 170

Links

Other CCHC ZF,CSD family RBPs
Other Xenopus laevis RBPs

74 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPIJ015349 Culex quinquefasciatus CPIJ015349 N 0.000
CpipJ_CPIJ006994 Culex pipiens CpipJ_CPIJ006994 N 0.000
CpipJ_CPIJ007614 Culex pipiens CpipJ_CPIJ007614 N 0.000
CpipJ_CPIJ009289 Culex pipiens CpipJ_CPIJ009289 N 0.000
CpipJ_CPIJ009564 Culex pipiens CpipJ_CPIJ009564 N 0.000
CpipJ_CPIJ014538 Culex pipiens CpipJ_CPIJ014538 N 0.000