ENSCSAVG00000009055 (Ciona savignyi)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		ENSCSAVG00000009055 T06990_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000015432 KH 135 220
ENSCSAVP00000015432 CCHC ZF 275 292
ENSCSAVP00000015433 KH 59 144
ENSCSAVP00000015433 CCHC ZF 199 216

Links

Other CCHC ZF,KH family RBPs
Other Ciona savignyi RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30078.m002213 Ricinus communis 30078.m002213 N 0.000
cassava15018.m1 Manihot esculenta cassava15018.m1 N 0.000
CHGG_08634 Chaetomium globosum CHGG_08634 N 0.000
CIMG_04239 Coccidioides immitis CIMG_04239 N 0.000
CPSG_03018 Coccidioides posadasii CPSG_03018 N 0.000
Cucsa.378900 Cucumis sativus Cucsa.378900 N 0.000
Glyma03g34580.1 Glycine max Glyma03g34580.1 N 0.000
Glyma19g37270.1 Glycine max Glyma19g37270.1 N 0.000
Medtr7g124520 Medicago truncatula Medtr7g124520 N 0.000
Pa_4_2370 Podospora anserina Pa_4_2370 N 0.000
ppa020841m Prunus persica ppa020841m N 0.000
SJAG_04071 Schizosaccharomyces japonicus SJAG_04071 N 0.000
VDAG_06680 Verticillium dahliae VDAG_06680 N 0.000