CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
13113.t00032
(
Oryza sativa
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
13113.t00032
T09253_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
13113.m00159
CCHC ZF
657
674
RLCFNCFEPGHFADKCPK
Links
Other
CCHC ZF
family RBPs
Other
Oryza sativa
RBPs
599 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EDI_110230
Entamoeba dispar
EDI_110230
N
0.000
EDI_110350
Entamoeba dispar
EDI_110350
N
0.000
EHI_054760
Entamoeba histolytica
EHI_054760
N
0.000
estExt_Genewise1Plus.C_40228
Batrachochytrium dendrobatidis
estExt_Genewise1Plus.C_40228
N
0.000