LOC_Os01g23020 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os01g23020 T10741_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os01g23020.1 CCHC ZF 630 647

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

599 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_13853 Botrytis cinerea BC1G_13853 N 0.000
ACLA_013700 Aspergillus clavatus CADACLAG00000914 N 0.000
AFLA_119410 Aspergillus flavus CADAFLAG00012513 N 0.000
AFUA_5G10830 Aspergillus fumigatus CADAFUAG00006235 N 0.000
An14g03770 Aspergillus niger CADANGAG00011313 N 0.000
AO090010000458 Aspergillus oryzae CADAORAG00004519 N 0.000
ATEG_07640 Aspergillus terreus CADATEAG00000474 N 0.000
NFIA_076400 Neosartorya fischeri CADNFIAG00008573 N 0.000
CPSG_07949 Coccidioides posadasii CPSG_07949 N 0.000
estExt_fgenesh1_pg.C_30380 Cryphonectria parasitica estExt_fgenesh1_pg.C_30380 N 0.000
estExt_fgenesh1_pg.C_40021 Neurospora tetrasperma estExt_fgenesh1_pg.C_40021 N 0.000
estExt_fgenesh2_pg.C_30399 Neurospora discreta estExt_fgenesh2_pg.C_30399 N 0.000
fgenesh1_pg.C_scaffold_24000012 Trichoderma virens fgenesh1_pg.C_scaffold_24000012 N 0.000
fgenesh1_pm.C_scaffold_24000056 Trichoderma reesei fgenesh1_pm.C_scaffold_24000056 N 0.000
GLRG_07196 Colletotrichum graminicola GLRG_07196 N 0.000
gw1.1.76.1 Myceliophthora thermophila gw1.1.76.1 N 0.000
MGG_08807 Magnaporthe oryzae MGG_08807 N 0.000
NCU06318 Neurospora crassa NCU06318 N 0.000
SS1G_13866 Sclerotinia sclerotiorum SS1G_13866 N 0.000