LOC_Os04g06420 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os04g06420 T11146_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g06420.1 CCHC ZF 100 117
LOC_Os04g06420.1 CCHC ZF 201 218
LOC_Os04g06420.1 CCHC ZF 237 253
LOC_Os04g06420.1 CCHC ZF 309 326

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_kg.C_1330010 Phytophthora capsici estExt_fgenesh1_kg.C_1330010 N 0.000
fgenesh1_pg.C_scaffold_5000224 Phytophthora ramorum fgenesh1_pg.C_scaffold_5000224 N 0.000
fgenesh1_pg.C_scaffold_8000198 Phytophthora ramorum fgenesh1_pg.C_scaffold_8000198 N 0.000
PITG_01591 Phytophthora infestans PITG_01591 N 0.000