LOC_Os04g19570 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os04g19570 T11243_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g19570.1 CCHC ZF 286 303

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

599 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH84352 Xenopus laevis AAH84352 N 0.000
Ame_R002771 Ailuropoda melanoleuca Ame_R002771 N 0.000
ZC3H13 Anolis carolinensis ENSACAG00000016434 N 0.000
Q0VCM8_BOVIN Bos taurus ENSBTAG00000007067 N 0.000
ENSCAFG00000004511 Canis familiaris ENSCAFG00000004511 N 0.000
ZC3H13 Choloepus hoffmanni ENSCHOG00000009724 N 0.000
LOC100409664 Callithrix jacchus ENSCJAG00000016756 N 0.000
ZC3H13 Cavia porcellus ENSCPOG00000000646 N 0.000
zc3h13 Danio rerio ENSDARG00000037177 N 0.000
Zc3h13 Dipodomys ordii ENSDORG00000000600 N 0.000
LOC100050744 Equus caballus ENSECAG00000022843 N 0.000
ZC3H13 Erinaceus europaeus ENSEEUG00000014643 N 0.000
ZC3H13 Homo sapiens ENSG00000123200 N 0.000
ZC3H13 Gasterosteus aculeatus ENSGACG00000015166 N 0.000
ZC3H13 Gallus gallus ENSGALG00000016984 N 0.000
ZC3H13 Gorilla gorilla ENSGGOG00000005496 N 0.000
ENSLAFG00000016747 Loxodonta africana ENSLAFG00000016747 N 0.000
ZC3H13 Meleagris gallopavo ENSMGAG00000014996 N 0.000
ZC3H13 Myotis lucifugus ENSMLUG00000006920 N 0.000
LOC723737 Macaca mulatta ENSMMUG00000017025 N 0.000
ENSMODG00000014969 Monodelphis domestica ENSMODG00000014969 N 0.000
Zc3h13 Mus musculus ENSMUSG00000022000 N 0.000
ZC3H13 Ornithorhynchus anatinus ENSOANG00000015580 N 0.000
ZC3H13 Oryctolagus cuniculus ENSOCUG00000015173 N 0.000
ZC3H13 Oryzias latipes ENSORLG00000005201 N 0.000
ZC3H13 Procavia capensis ENSPCAG00000001146 N 0.000
ENSPPYG00000005344 Pongo pygmaeus ENSPPYG00000005344 N 0.000
ZC3H13 Pan troglodytes ENSPTRG00000005851 N 0.000
ZC3H13 Pteropus vampyrus ENSPVAG00000012353 N 0.000
Zc3h13 Rattus norvegicus ENSRNOG00000011237 N 0.000
ZC3H13 Sorex araneus ENSSARG00000007106 N 0.000
ZC3H13 Sus scrofa ENSSSCG00000009414 N 0.000
ZC3H13 Taeniopygia guttata ENSTGUG00000012299 N 0.000
ZC3H13 Tetraodon nigroviridis ENSTNIG00000014523 N 0.000
ZC3H13 Takifugu rubripes ENSTRUG00000007455 N 0.000
ZC3H13 Tarsius syrichta ENSTSYG00000000992 N 0.000
ZC3H13 Tursiops truncatus ENSTTRG00000003611 N 0.000
ZC3H13 Vicugna pacos ENSVPAG00000005179 N 0.000
zc3h13 Xenopus tropicalis ENSXETG00000014637 N 0.000