CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
LOC_Os08g11380
(
Oryza sativa
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
LOC_Os08g11380
T11917_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LOC_Os08g11380.1
CCHC ZF
438
455
RLCFNCFEPGHFADKCPK
Links
Other
CCHC ZF
family RBPs
Other
Oryza sativa
RBPs
599 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EEB88731.1
Moniliophthora perniciosa
EEB88731.1
N
0.000
EEB88734.1
Moniliophthora perniciosa
EEB88734.1
N
0.000
EEB88827.1
Moniliophthora perniciosa
EEB88827.1
N
0.000
EEB88856.1
Moniliophthora perniciosa
EEB88856.1
N
0.000
EEB88904.1
Moniliophthora perniciosa
EEB88904.1
N
0.000
EEB89022.1
Moniliophthora perniciosa
EEB89022.1
N
0.000
EEB89072.1
Moniliophthora perniciosa
EEB89072.1
N
0.000
EEB89663.1
Moniliophthora perniciosa
EEB89663.1
N
0.000
EEB89900.1
Moniliophthora perniciosa
EEB89900.1
N
0.000
PTTG_10798
Puccinia triticina
PTTG_10798
N
0.000