LOC_Os10g12770 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os10g12770 T12220_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os10g12770.1 CCHC ZF 684 701

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

599 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08285.1 Alternaria brassicicola AB08285.1 N 0.000
BC1G_15665 Botrytis cinerea BC1G_15665 N 0.000
BDBG_05461 Blastomyces dermatitidis BDBG_05461 N 0.000
ACLA_080910 Aspergillus clavatus CADACLAG00007889 N 0.000
An12g04760 Aspergillus niger CADANGAG00009919 N 0.000
CHGG_01583 Chaetomium globosum CHGG_01583 N 0.000
CIMG_01023 Coccidioides immitis CIMG_01023 N 0.000
CPSG_02191 Coccidioides posadasii CPSG_02191 N 0.000
EAT89416.2 Phaeosphaeria nodorum EAT89416.2 N 0.000
estExt_fgenesh1_pg.C_160182 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160182 N 0.000
estExt_fgenesh3_kg.C_70160 Neurospora discreta estExt_fgenesh3_kg.C_70160 N 0.000
estExt_Genewise1Plus.C_20994 Myceliophthora thermophila estExt_Genewise1Plus.C_20994 N 0.000
estExt_Genewise1Plus.C_50197 Neurospora tetrasperma estExt_Genewise1Plus.C_50197 N 0.000
e_gw1.1.4045.1 Trichoderma atroviride e_gw1.1.4045.1 N 0.000
e_gw1.4.400.1 Trichoderma reesei e_gw1.4.400.1 N 0.000
e_gw1.4.931.1 Thielavia terrestris e_gw1.4.931.1 N 0.000
e_gw1.6.1433.1 Cryphonectria parasitica e_gw1.6.1433.1 N 0.000
e_gw1.7.1285.1 Trichoderma virens e_gw1.7.1285.1 N 0.000
fgenesh1_pm.00772_#_139 Aspergillus carbonarius fgenesh1_pm.00772_#_139 N 0.000
FGSG_00370 Fusarium graminearum FGSG_00370 N 0.000
FOXG_00686 Fusarium oxysporum FOXG_00686 N 0.000
FVEG_00825 Fusarium verticillioides FVEG_00825 N 0.000
GLRG_10397 Colletotrichum graminicola GLRG_10397 N 0.000
GSTUMT00004863001 Tuber melanosporum GSTUMT00004863001 N 0.000
HCAG_03684 Histoplasma capsulatum HCAG_03684 N 0.000
MGG_09885 Magnaporthe oryzae MGG_09885 N 0.000
NCU03311 Neurospora crassa NCU03311 N 0.000
PABG_01625 Paracoccidioides brasiliensis PABG_01625 N 0.000
Pa_1_6970 Podospora anserina Pa_1_6970 N 0.000
SNOG_02685 Stagonospora nodorum SNOG_02685 N 0.000
SS1G_09907 Sclerotinia sclerotiorum SS1G_09907 N 0.000
UREG_00968 Uncinocarpus reesii UREG_00968 N 0.000
VDAG_04254 Verticillium dahliae VDAG_04254 N 0.000