CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TvY486_0401270
(
Trypanosoma vivax
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
TvY486_0401270
T13075_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TvY486_0401270
CCHC ZF
72
89
KGCWRCAQRGHSSIQCPV
Links
Other
CCHC ZF
family RBPs
Other
Trypanosoma vivax
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Tbg972.4.1440
Trypanosoma brucei
Tbg972.4.1440
N
0.833
Tc00.1047053504057.70
Trypanosoma cruzi
Tc00.1047053504057.70
N
0.778
TcIL3000.4.1130
Trypanosoma congolense
TcIL3000.4.1130
N
0.778