CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CIMG_01501
(
Coccidioides immitis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CIMG_01501
T17568_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_01501T0
KH
192
255
TETINIDSKLVGLIIGRQGDNLRRIESDTGTRIQFLDSPESNVNIRPCRISGTRAARSDAKAEI
CIMG_01501T0
KH
297
360
STQMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPEDKSLNGLRPVNLNGAPRAIQRAKDLI
CIMG_01501T0
KH
398
459
DSIFIPKESVGMIIGKGGDTIKELQNITGCKVNILPAVGREVDREVVMIGSKQAIEQMKKSI
Links
Other
KH
family RBPs
Other
Coccidioides immitis
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPSG_01673
Coccidioides posadasii
CPSG_01673
N
1.000
UREG_05098
Uncinocarpus reesii
UREG_05098
N
0.895