CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ANKRD17
(
Tursiops truncatus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSTTRG00000016542
T19722_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ANKHD1
M002_0.6
Homo sapiens
AGACGWW
RNAcompete
Ray et al.(2013)
RNCMPT00002
0.746
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000015683
KH
1701
1763
SKKVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRGGTESTRQATQLI
Links
Other
KH
family RBPs
Other
Tursiops truncatus
RBPs
74 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MYEF2
Homo sapiens
ENSG00000104177
N
0.000
HNRNPM
Ornithorhynchus anatinus
ENSOANG00000010259
N
0.000
ENSOCUG00000023204
Oryctolagus cuniculus
ENSOCUG00000023204
N
0.000