CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSTUMT00008009001
(
Tuber melanosporum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
GSTUMT00008009001
T21745_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSTUMT00008009001
KH
137
194
FVKRRQRILGPGGSTLKALELLTGCYILVQGSTVSAMGGYKGLKEVRRVVEGCMDNIH
Links
Other
KH
family RBPs
Other
Tuber melanosporum
RBPs
50 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB09506.1
Alternaria brassicicola
AB09506.1
N
0.000
Aqu1.214150
Amphimedon queenslandica
Aqu1.214150
N
0.000
BC1G_07253
Botrytis cinerea
BC1G_07253
N
0.000
BDBG_05422
Blastomyces dermatitidis
BDBG_05422
N
0.000
ACLA_068370
Aspergillus clavatus
CADACLAG00006893
N
0.000
AFLA_130110
Aspergillus flavus
CADAFLAG00010069
N
0.000
An02g14330
Aspergillus niger
CADANGAG00002959
N
0.000
ANIA_07456
Aspergillus nidulans
CADANIAG00000549
N
0.000
AO090001000713
Aspergillus oryzae
CADAORAG00000650
N
0.000
ATEG_06786
Aspergillus terreus
CADATEAG00009636
N
0.000
NFIA_082680
Neosartorya fischeri
CADNFIAG00008521
N
0.000
CHGG_01436
Chaetomium globosum
CHGG_01436
N
0.000
CIMG_00993
Coccidioides immitis
CIMG_00993
N
0.000
CPSG_02222
Coccidioides posadasii
CPSG_02222
N
0.000
estExt_fgenesh1_pg.C_20441
Myceliophthora thermophila
estExt_fgenesh1_pg.C_20441
N
0.000
estExt_fgenesh1_pm.C_320007
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_320007
N
0.000
estExt_fgenesh2_kg.C_270002
Neurospora tetrasperma
estExt_fgenesh2_kg.C_270002
N
0.000
estExt_fgenesh2_kg.C_40138
Thielavia terrestris
estExt_fgenesh2_kg.C_40138
N
0.000
estExt_fgenesh2_pg.C_40112
Neurospora discreta
estExt_fgenesh2_pg.C_40112
N
0.000
estExt_Genewise1.C_10238
Trichoderma reesei
estExt_Genewise1.C_10238
N
0.000
estExt_Genewise1.C_21367
Trichoderma virens
estExt_Genewise1.C_21367
N
0.000
estExt_Genewise1.C_50824
Cryphonectria parasitica
estExt_Genewise1.C_50824
N
0.000
estExt_Genewise1Plus.C_100598
Trichoderma atroviride
estExt_Genewise1Plus.C_100598
N
0.000
estExt_Genewise1Plus.C_14054
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_14054
N
0.000
fgenesh1_pg.sca_1_chr1_3_0000477
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0000477
N
0.000
fgenesh1_pm.00082_#_90
Aspergillus carbonarius
fgenesh1_pm.00082_#_90
N
0.000
FGSG_00536
Fusarium graminearum
FGSG_00536
N
0.000
FOXG_00520
Fusarium oxysporum
FOXG_00520
N
0.000
FVEG_00993
Fusarium verticillioides
FVEG_00993
N
0.000
GLRG_04563
Colletotrichum graminicola
GLRG_04563
N
0.000
GSTUMT00006858001
Tuber melanosporum
GSTUMT00006858001
N
0.000
HCAG_03657
Histoplasma capsulatum
HCAG_03657
N
0.000
MCYG_04660
Microsporum canis
MCYG_04660
N
0.000
MGG_01579
Magnaporthe oryzae
MGG_01579
N
0.000
MGYG_02003
Microsporum gypseum
MGYG_02003
N
0.000
NCU02837
Neurospora crassa
NCU02837
N
0.000
PABG_01240
Paracoccidioides brasiliensis
PABG_01240
N
0.000
Pa_1_8040
Podospora anserina
Pa_1_8040
N
0.000
Pc22g08360
Penicillium chrysogenum
Pc22g08360
N
0.000
PMAA_028810
Penicillium marneffei
PMAA_028810
N
0.000
PTRG_02020
Pyrenophora tritici repentis
PTRG_02020
N
0.000
SS1G_09992
Sclerotinia sclerotiorum
SS1G_09992
N
0.000
TEQG_02446
Trichophyton equinum
TEQG_02446
N
0.000
TERG_03272
Trichophyton rubrum
TERG_03272
N
0.000
TESG_02801
Trichophyton tonsurans
TESG_02801
N
0.000
UREG_00940
Uncinocarpus reesii
UREG_00940
N
0.000
VDAG_03069
Verticillium dahliae
VDAG_03069
N
0.000
VDBG_05905
Verticillium albo atrum
VDBG_05905
N
0.000