CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MDP0000212912
(
Malus x domestica
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
MDP0000212912
T21827_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000212912
KH
38
97
VYRILCPGGVIGSVIGKSGKVINLIRQDTRAKIKVVDPFPGAKERVITIYSYVKDKEEVE
MDP0000212912
KH
142
212
DCQILVPSSQSANIIGKAGSTIKKLRSKTRTNIKIVAKDATDPTHSCAMDFDNFLMINGESEAVKKALFAV
MDP0000212912
KH
310
366
IVQVLCPFDKIGRVIGKGGGTIKSIRQASGARIEVDDTKDRDECVISVTATESPDDL
MDP0000212912
KH
390
455
SIRLLIPSKFIGCIIGKSGSIINEIRKRTKADVRISKADKPRGADANELVEVAGDPSSLRDALIQI
MDP0000212912
KH
556
618
TLEMLVPVNAVGKVMGKGGANIANIRKISGAMVEISESKSSRGDHVAHISGTPEQMRTAENLI
Links
Other
KH
family RBPs
Other
Malus x domestica
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCHAS_123310
Plasmodium chabaudi
PCHAS_123310
N
0.000
PFE0885w
Plasmodium falciparum
PFE0885w
N
0.000
PY01620
Plasmodium yoelii
PY01620
N
0.000