MDP0000119275 (Malus x domestica)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 MDP0000119275 T27799_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000119275 RanBP ZF 256 285
MDP0000119275 RanBP ZF 289 318

Links

Other RanBP ZF family RBPs
Other Malus x domestica RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30128.m008782 Ricinus communis 30128.m008782 N 0.933
AT1G55040 Arabidopsis thaliana AT1G55040-TAIR-G N 0.933
BRADI1G52630 Brachypodium distachyon BRADI1G52630 N 0.883
cassava22805.valid.m1 Manihot esculenta cassava22805.valid.m1 N 0.917
chr1.CM0476.10.nd Lotus japonicus chr1.CM0476.10.nd N 0.900
XM_002891893.1 Arabidopsis lyrata fgenesh2_kg.1__4733__AT1G55040.1 N 0.933
Glyma03g39710.1 Glycine max Glyma03g39710.1 N 0.867
Glyma19g42310.1 Glycine max Glyma19g42310.1 N 0.883
GRMZM2G080139 Zea mays GRMZM2G080139 N 0.850
GSVIVG00000088001 Vitis vinifera GSVIVG00000088001 N 0.900
LOC_Os07g22024 Oryza sativa LOC_Os07g22024 N 0.883
MDP0000200660 Malus x domestica MDP0000200660 N 1.000
MDP0000255715 Malus x domestica MDP0000255715 N 1.000
Medtr7g139130 Medicago truncatula Medtr7g139130 N 0.867
PK18374.1 Cannabis sativa PK18374.1 N 0.867
B9MZV5_POPTR Populus trichocarpa POPTR_0005s03600 N 0.933
B9I7T0_POPTR Populus trichocarpa POPTR_0013s02330 N 0.917
SB02G009630 Sorghum bicolor Sb02g009630 N 0.833