UREG_03354 (Uncinocarpus reesii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 UREG_03354 T31341_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
URET_03354 RRM 31 70
URET_03354 RRM 91 161
URET_03354 RRM 218 261

Links

Other RRM family RBPs
Other Uncinocarpus reesii RBPs

1 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
27613.m000645 Ricinus communis 27613.m000645 N 0.000
29223.m000023 Ricinus communis 29223.m000023 N 0.000
30169.m006471 Ricinus communis 30169.m006471 N 0.000
AT2G05160 Arabidopsis thaliana AT2G05160-TAIR-G N 0.000
BGIOSIBCE010969 Oryza indica BGIOSIBCE010969 N 0.000
BGIOSIBCE010970 Oryza indica BGIOSIBCE010970 N 0.000
cassava2158.valid.m1 Manihot esculenta cassava2158.valid.m1 N 0.000
cassava30651.valid.m1 Manihot esculenta cassava30651.valid.m1 N 0.000
cassava30652.valid.m1 Manihot esculenta cassava30652.valid.m1 N 0.000
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.000
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.000
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.000
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.000
cassava7292.valid.m1 Manihot esculenta cassava7292.valid.m1 N 0.000
cassava7293.valid.m1 Manihot esculenta cassava7293.valid.m1 N 0.000
cassava7294.valid.m1 Manihot esculenta cassava7294.valid.m1 N 0.000
cassava9561.m1 Manihot esculenta cassava9561.m1 N 0.000
chr2.CM0018.150.nc Lotus japonicus chr2.CM0018.150.nc N 0.000
Cucsa.166080 Cucumis sativus Cucsa.166080 N 0.000
Cucsa.333940 Cucumis sativus Cucsa.333940 N 0.000
e_gw1.136.54.1 Physcomitrella patens e_gw1.136.54.1 N 0.000
XM_002876131.1 Arabidopsis lyrata fgenesh2_kg.5__1664__AT3G52980.1 N 0.000
Glyma01g43700.1 Glycine max Glyma01g43700.1 N 0.000
Glyma08g43790.1 Glycine max Glyma08g43790.1 N 0.000
Glyma09g35980.1 Glycine max Glyma09g35980.1 N 0.000
Glyma09g35990.1 Glycine max Glyma09g35990.1 N 0.000
Glyma11g01780.1 Glycine max Glyma11g01780.1 N 0.000
Glyma12g01340.1 Glycine max Glyma12g01340.1 N 0.000
Glyma12g01350.1 Glycine max Glyma12g01350.1 N 0.000
Glyma14g01930.1 Glycine max Glyma14g01930.1 N 0.000
GRMZM2G044004 Zea mays GRMZM2G044004 N 0.000
GSVIVG00001467001 Vitis vinifera GSVIVG00001467001 N 0.000
GSVIVG00031538001 Vitis vinifera GSVIVG00031538001 N 0.000
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.000
LjT28K11.10.nd Lotus japonicus LjT28K11.10.nd N 0.000
LOC_Os03g21140 Oryza sativa LOC_Os03g21140 N 0.000
LOC_Os03g21160 Oryza sativa LOC_Os03g21160 N 0.000
MDP0000120231 Malus x domestica MDP0000120231 N 0.000
MDP0000120462 Malus x domestica MDP0000120462 N 0.000
MDP0000214614 Malus x domestica MDP0000214614 N 0.000
MDP0000243086 Malus x domestica MDP0000243086 N 0.000
MDP0000906147 Malus x domestica MDP0000906147 N 0.000
Medtr5g008940 Medicago truncatula Medtr5g008940 N 0.000
mgf000973m Mimulus guttatus mgf000973m N 0.000
mgf003557m Mimulus guttatus mgf003557m N 0.000
PK01281.1 Cannabis sativa PK01281.1 N 0.000
POPTR_0001s05760 Populus trichocarpa POPTR_0001s05760 N 0.000
B9GI27_POPTR Populus trichocarpa POPTR_0001s26250 N 0.000
B9GTF9_POPTR Populus trichocarpa POPTR_0002s22240 N 0.000
B9GWA9_POPTR Populus trichocarpa POPTR_0003s20310 N 0.000
B9HNZ4_POPTR Populus trichocarpa POPTR_0009s05520 N 0.000
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.000
ppa002383m Prunus persica ppa002383m N 0.000
ppa002413m Prunus persica ppa002413m N 0.000
ppa003564m Prunus persica ppa003564m N 0.000
ppa019338m Prunus persica ppa019338m N 0.000
ppa023263m Prunus persica ppa023263m N 0.000
SB08G001980 Sorghum bicolor Sb08g001980 N 0.000