CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
amel4_ncbi_hmm10980
(
Apis mellifera
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
amel4_ncbi_hmm10980
T31835_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
amel4_ncbi_hmm10980
RRM
98
167
LLVSNLDFGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMN
Links
Other
RRM
family RBPs
Other
Apis mellifera
RBPs
101 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL008263
Aedes aegypti
AAEL008263
N
0.000
AGAP010288
Anopheles gambiae
AGAP010288
N
0.000
amel4_ncbi_hmm6926
Apis mellifera
amel4_ncbi_hmm6926
N
0.000
amel4_ncbi_hmm6926
Tribolium castaneum
amel4_ncbi_hmm6926
N
0.000
CPIJ008195
Culex quinquefasciatus
CPIJ008195
N
0.000
CpipJ_CPIJ008195
Culex pipiens
CpipJ_CPIJ008195
N
0.000
YAF2
Taeniopygia guttata
ENSTGUG00000005817
N
0.000
estExt_fgenesh1_pg.C_1000062
Nematostella vectensis
estExt_fgenesh1_pg.C_1000062
N
0.000
RYBP
Drosophila melanogaster
FBgn0034763
N
0.000
GA11466-RA
Drosophila pseudoobscura
FBgn0071517
N
0.000
GF11639
Drosophila ananassae
FBgn0088679
N
0.000
GG22783
Drosophila erecta
FBgn0114948
N
0.000
GH19772
Drosophila grimshawi
FBgn0127236
N
0.000
GI20311
Drosophila mojavensis
FBgn0143047
N
0.000
GL11369
Drosophila persimilis
FBgn0148978
N
0.000
GM15940
Drosophila sechellia
FBgn0170856
N
0.000
GD11693
Drosophila simulans
FBgn0183433
N
0.000
GJ22038
Drosophila virilis
FBgn0209152
N
0.000
GK21447
Drosophila willistoni
FBgn0223439
N
0.000
GE14012
Drosophila yakuba
FBgn0231642
N
0.000
fgenesh1_pg.C_scaffold_97000016
Daphnia pulex
fgenesh1_pg.C_scaffold_97000016
N
0.000
ISCW017896
Ixodes scapularis
ISCW017896
N
0.000
nasonia_NCBI_hmm137104
Nasonia vitripennis
nasonia_NCBI_hmm137104
N
0.000
XP_001183014.1
Strongylocentrotus purpuratus
XP_001183014.1
N
0.000
XP_001186443.1
Strongylocentrotus purpuratus
XP_001186443.1
N
0.000