AT5G19960 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT5G19960-TAIR-G T32822_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT5G19960.1-P RRM 9 78

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

2 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB01983.1 Alternaria brassicicola AB01983.1 N 0.000
ACLA_054290 Aspergillus clavatus CADACLAG00005245 N 0.000
AFLA_114740 Aspergillus flavus CADAFLAG00013392 N 0.000
An14g00750 Aspergillus niger CADANGAG00011011 N 0.000
AO090206000081 Aspergillus oryzae CADAORAG00012242 N 0.000
ATEG_02228 Aspergillus terreus CADATEAG00000017 N 0.000
CPSG_05597 Coccidioides posadasii CPSG_05597 N 0.000
estExt_fgenesh1_pg.C_110327 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_110327 N 0.000
estExt_Genewise1.C_30334 Cochliobolus heterostrophus C5 estExt_Genewise1.C_30334 N 0.000
e_gw1.3.693.1 Trichoderma reesei e_gw1.3.693.1 N 0.000
fgenesh1_pg.C_scaffold_13000098 Trichoderma virens fgenesh1_pg.C_scaffold_13000098 N 0.000
fgenesh1_pg.C_scaffold_8000400 Trichoderma atroviride fgenesh1_pg.C_scaffold_8000400 N 0.000
fgenesh1_pm.00795_#_61 Aspergillus carbonarius fgenesh1_pm.00795_#_61 N 0.000
FGSG_05263 Fusarium graminearum FGSG_05263 N 0.000
FOXG_08443 Fusarium oxysporum FOXG_08443 N 0.000
HCAG_08016 Histoplasma capsulatum HCAG_08016 N 0.000
MCYG_02556 Microsporum canis MCYG_02556 N 0.000
Pc13g06240 Penicillium chrysogenum Pc13g06240 N 0.000
PMAA_085380 Penicillium marneffei PMAA_085380 N 0.000
UREG_02651 Uncinocarpus reesii UREG_02651 N 0.000