CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BGIOSIBCE022975
(
Oryza indica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
BGIOSIBCE022975
T33011_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSIBCE022975
RRM
244
314
LFVRELNKVTQDEDLYTIFSHFGSVTSAEIIRDYKTGDSLCFAFIEFEKKEACERAFFMMDNCLIDDRRIR
Links
Other
RRM
family RBPs
Other
Oryza indica
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EHI_007320
Entamoeba histolytica
EHI_007320
N
0.000
EIN_124180
Entamoeba invadens
EIN_124180
N
0.000
PTTG_05310
Puccinia triticina
PTTG_05310
N
0.000