CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSLAFG00000028496
(
Loxodonta africana
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSLAFG00000028496
T38128_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000019439
RRM
151
172
LYVGNIPFGITEEAMMDFFNIQ
ENSLAFP00000019439
RRM
181
225
APGNPILAVQINQDKNFAFLEFRSVDETTQATALDGIIFQGQSLK
ENSLAFP00000019439
RRM
261
331
LFIEGLPTYLNDDQVKELLTSFGPLKAFSLVKDSATGLSKGYAVCEYVDINDTDQATAGLNGMQLGDKKLL
ENSLAFP00000019439
RRM
395
456
MEDVREECSKYGLVKSMEIPRPVDGVEVPGCGKIFVEFTTVFDCQKAMQGLTGRKFANRVVV
Links
Other
RRM
family RBPs
Other
Loxodonta africana
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL003077
Aedes aegypti
AAEL003077
N
0.000
CpipJ_CPIJ000025
Culex pipiens
CpipJ_CPIJ000025
N
0.000