CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TNRC6A
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000007672
T39497_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000012219
RRM
1719
1783
LVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTIL
ENSOANP00000012220
RRM
1670
1734
LVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTIL
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
117 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh2_pg.scaffold_31000080
Branchiostoma floridae
fgenesh2_pg.scaffold_31000080
N
0.000