CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM12B
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000015735
T39572_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000024799
RRM
25
89
RLQGLPVVAGPVDIRHFFSGLNIPDGGVHIIGGEIGEAFIIFATDEDARRAMSCSGGFIKDSLIE
ENSOANP00000024799
RRM
184
243
LFLHGMPYSVTEGEVHAFFSGLRVDGVILLKHHNGRNNGDGFVKFATSHDALGGLQRHRH
ENSOANP00000024799
RRM
318
386
VHLKNLSLSTEKKDIKAFFRNIDLTSNQIKFLYKDQKRTRSAFVMFKTPRDYNEALCLHKAVLRQRPVH
ENSOANP00000024799
RRM
435
504
IYIRNFPFDVTKIEVQKFFAGFSVEEEDVYLLYDDKGVGLGEALVRFRSEGQALEAETLNRKRFLGTEVL
ENSOANP00000024799
RRM
637
707
IKIRNLPFKATVNEILDFFHGYRVIPESVSIQLNEQGLPSGDAIVAMTDYDEAVAAVDELNDRPVGPRKVK
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM12B
Loxodonta africana
ENSLAFG00000029949
N
0.708
RBM12B
Monodelphis domestica
ENSMODG00000007436
N
0.813
Rbm12b
Mus musculus
ENSMUSG00000046667
N
0.717
C430048L16Rik
Mus musculus
ENSMUSG00000052137
N
0.711
Rbm12b
Rattus norvegicus
ENSRNOG00000016330
N
0.718