CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PSPC1
(
Otolemur garnettii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOGAG00000012643
T39893_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000011326
RRM
34
97
LTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAF
Links
Other
RRM
family RBPs
Other
Otolemur garnettii
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
21543_Multiple
Saccharomyces mikatae
21543_Multiple
N
0.000
24695_YPL190C
Saccharomyces bayanus
24695_YPL190C
N
0.000
KLLA0E19229g
Kluyveromyces lactis
KLLA0E19229g
N
0.000
Skud_Contig1252.2
Saccharomyces kudriavzevii
Skud_Contig1252.2
N
0.000
NAB3
Saccharomyces cerevisiae
YPL190C
N
0.000
ZYRO0G08360g
Zygosaccharomyces rouxii
ZYRO0G08360g
N
0.000