CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MKI67IP
(
Oryzias latipes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSORLG00000018551
T40256_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000023197
RRM
46
116
VYVGHLPLGLFEPQLKSYFEQFGSVQRLRLSRSKKTGGSKGFAFVEFECEEVAKIVAETMNNYLMGEKLIK
Links
Other
RRM
family RBPs
Other
Oryzias latipes
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MK67I_BOVIN
Bos taurus
ENSBTAG00000019387
N
0.704
MKI67IP
Choloepus hoffmanni
ENSCHOG00000002227
N
0.789
LOC100386303
Callithrix jacchus
ENSCJAG00000013386
N
0.718
mki67ip
Danio rerio
ENSDARG00000040666
N
0.859
LOC100055172
Equus caballus
ENSECAG00000018478
N
0.718
MKI67IP
Erinaceus europaeus
ENSEEUG00000008535
N
0.732
MKI67IP
Homo sapiens
ENSG00000155438
N
0.718
MKI67IP
Gasterosteus aculeatus
ENSGACG00000001551
N
0.859
MKI67IP
Gallus gallus
ENSGALG00000011650
N
0.775
MKI67IP
Gorilla gorilla
ENSGGOG00000023498
N
0.718
MKI67IP
Loxodonta africana
ENSLAFG00000030731
N
0.789
MKI67IP
Meleagris gallopavo
ENSMGAG00000011953
N
0.789
MKI67IP
Macaca mulatta
ENSMMUG00000020928
N
0.732
XM_001364715.1
Monodelphis domestica
ENSMODG00000000152
N
0.732
ENSPPYG00000018557
Pongo pygmaeus
ENSPPYG00000018557
N
0.704
ENSPPYG00000025875
Pongo pygmaeus
ENSPPYG00000025875
N
0.732
MKI67IP
Pan troglodytes
ENSPTRG00000012419
N
0.704
MKI67IP
Pteropus vampyrus
ENSPVAG00000016707
N
0.704
MKI67IP
Tetraodon nigroviridis
ENSTNIG00000017831
N
0.831
MKI67IP
Takifugu rubripes
ENSTRUG00000005206
N
0.831
mki67ip
Xenopus tropicalis
ENSXETG00000000839
N
0.718
estExt_fgenesh2_pg.C_7810009
Branchiostoma floridae
estExt_fgenesh2_pg.C_7810009
N
0.718
estExt_gwp.C_4020036
Branchiostoma floridae
estExt_gwp.C_4020036
N
0.718
Q7SYS2
Xenopus laevis
Q7SYS2
N
0.704