ENSPPYG00000003786 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000003786 T40460_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF2
M070_0.6 		Homo sapiens GGAGWD RNAcompete
Ray et al.(2013)
RNCMPT00072 		0.789
SRSF2
M352_0.6 		Homo sapiens AGSAGAGUA SELEX
Cook et al.(2011)
953_7543047 		0.789
SRSF2
M332_0.6 		Homo sapiens UGUUCSAGWU SELEX
Cook et al.(2011)
791_10094314 		0.789
SRSF2
M274_0.6 		Homo sapiens GUUCGAGUA SELEX
Cook et al.(2011)
244_7543047 		0.789
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000004331 RRM 16 86

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL010340 Aedes aegypti AAEL010340 I 0.718
AAH45229 Xenopus laevis AAH45229 I 0.775
AGAP009742 Anopheles gambiae AGAP009742 I 0.704
Ame_R006395 Ailuropoda melanoleuca Ame_R006395 I 0.746
CPIJ007047 Culex quinquefasciatus CPIJ007047 I 0.718
CpipJ_CPIJ007047 Culex pipiens CpipJ_CPIJ007047 I 0.718
SRSF2 Anolis carolinensis ENSACAG00000008553 I 0.789
SFRS2_BOVIN Bos taurus ENSBTAG00000018258 I 0.789
SRSF2 Canis familiaris ENSCAFG00000005147 I 0.789
SRSF2 Choloepus hoffmanni ENSCHOG00000014019 I 0.775
LOC100407351 Callithrix jacchus ENSCJAG00000004211 I 0.901
LOC100409845 Callithrix jacchus ENSCJAG00000013412 I 0.789
SRSF2 Danio rerio ENSDARG00000010906 I 0.775
srsf2 Danio rerio ENSDARG00000057484 I 0.775
SRSF2 Dasypus novemcinctus ENSDNOG00000000439 I 0.789
Srsf2 Dipodomys ordii ENSDORG00000014460 I 0.789
SRSF2 Erinaceus europaeus ENSEEUG00000009656 N 0.746
SRSF2 Homo sapiens ENSG00000161547 D 0.789
ENSG00000180771 Homo sapiens ENSG00000180771 I 0.930
SRSF2 Gasterosteus aculeatus ENSGACG00000003105 I 0.761
SRSF2 Gasterosteus aculeatus ENSGACG00000014884 I 0.775
SRSF2 Gorilla gorilla ENSGGOG00000014378 I 0.789
ENSGGOG00000022679 Gorilla gorilla ENSGGOG00000022679 I 0.915
ENSGGOG00000025657 Gorilla gorilla ENSGGOG00000025657 I 0.915
SRSF2 Macropus eugenii ENSMEUG00000016745 I 0.789
SRSF2 Meleagris gallopavo ENSMGAG00000004083 I 0.732
SRSF2 Microcebus murinus ENSMICG00000016956 I 0.789
SRSF2 Myotis lucifugus ENSMLUG00000009759 I 0.789
ENSMMUG00000007639 Macaca mulatta ENSMMUG00000007639 I 0.930
LOC707883 Macaca mulatta ENSMMUG00000022413 I 0.789
SRSF2 Monodelphis domestica ENSMODG00000001575 I 0.789
Srsf2 Mus musculus ENSMUSG00000034120 I 0.789
SRSF2 Ornithorhynchus anatinus ENSOANG00000002695 I 0.789
SRSF2 Oryctolagus cuniculus ENSOCUG00000021840 I 0.704
SRSF2 Oryzias latipes ENSORLG00000001230 I 0.746
Q9DGK5_ORYLA Oryzias latipes ENSORLG00000018688 I 0.746
ENSPPYG00000008668 Pongo pygmaeus ENSPPYG00000008668 I 0.789
SFRS2_PANTR Pan troglodytes ENSPTRG00000009692 I 0.789
ENSPTRG00000034554 Pan troglodytes ENSPTRG00000034554 I 0.944
SRSF2 Pteropus vampyrus ENSPVAG00000014264 I 0.789
Sfrs2 Rattus norvegicus ENSRNOG00000000248 I 0.789
SRSF2 Tupaia belangeri ENSTBEG00000014339 I 0.789
SRSF2 Taeniopygia guttata ENSTGUG00000007799 I 0.789
SRSF2 Tetraodon nigroviridis ENSTNIG00000001280 I 0.761
SRSF2 Takifugu rubripes ENSTRUG00000002362 I 0.746
SRSF2 Takifugu rubripes ENSTRUG00000018104 I 0.761
srsf2 Xenopus tropicalis ENSXETG00000025271 I 0.775