CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSPPYG00000025875
(
Pongo pygmaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPPYG00000025875
T40621_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000023504
RRM
12
82
VYVRHLPNLLNETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLK
Links
Other
RRM
family RBPs
Other
Pongo pygmaeus
RBPs
42 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R009999
Ailuropoda melanoleuca
Ame_R009999
N
0.859
MK67I_BOVIN
Bos taurus
ENSBTAG00000019387
N
0.859
MKI67IP
Canis familiaris
ENSCAFG00000004710
N
0.859
MKI67IP
Choloepus hoffmanni
ENSCHOG00000002227
N
0.831
LOC100386303
Callithrix jacchus
ENSCJAG00000013386
N
0.944
MKI67IP
Cavia porcellus
ENSCPOG00000007472
N
0.803
LOC100055172
Equus caballus
ENSECAG00000018478
N
0.859
MKI67IP
Erinaceus europaeus
ENSEEUG00000008535
N
0.859
MKI67IP
Felis catus
ENSFCAG00000010787
N
0.873
MKI67IP
Homo sapiens
ENSG00000155438
N
0.972
MKI67IP
Gasterosteus aculeatus
ENSGACG00000001551
N
0.718
MKI67IP
Gallus gallus
ENSGALG00000011650
N
0.761
MKI67IP
Gorilla gorilla
ENSGGOG00000023498
N
0.972
ENSGGOG00000025506
Gorilla gorilla
ENSGGOG00000025506
N
0.930
ENSGGOG00000025617
Gorilla gorilla
ENSGGOG00000025617
N
0.901
MKI67IP
Loxodonta africana
ENSLAFG00000030731
N
0.817
MKI67IP
Meleagris gallopavo
ENSMGAG00000011953
N
0.746
MKI67IP
Microcebus murinus
ENSMICG00000015787
N
0.817
ENSMMUG00000012234
Macaca mulatta
ENSMMUG00000012234
N
0.817
ENSMMUG00000019843
Macaca mulatta
ENSMMUG00000019843
N
0.831
MKI67IP
Macaca mulatta
ENSMMUG00000020928
N
0.972
ENSMMUG00000020929
Macaca mulatta
ENSMMUG00000020929
N
0.831
XR_012409.1
Macaca mulatta
ENSMMUG00000022731
N
0.859
XM_001364715.1
Monodelphis domestica
ENSMODG00000000152
N
0.746
ENSMODG00000008447
Monodelphis domestica
ENSMODG00000008447
N
0.704
Mki67ip
Mus musculus
ENSMUSG00000026377
N
0.775
MKI67IP
Ornithorhynchus anatinus
ENSOANG00000007522
N
0.732
MKI67IP
Oryctolagus cuniculus
ENSOCUG00000007451
N
0.859
MKI67IP
Otolemur garnettii
ENSOGAG00000016968
N
0.845
MKI67IP
Oryzias latipes
ENSORLG00000018551
N
0.732
ENSPPYG00000018557
Pongo pygmaeus
ENSPPYG00000018557
N
0.972
MKI67IP
Pan troglodytes
ENSPTRG00000012419
N
0.958
MKI67IP
Pteropus vampyrus
ENSPVAG00000016707
N
0.887
Mki67ip
Rattus norvegicus
ENSRNOG00000025701
N
0.746
MKI67IP
Sorex araneus
ENSSARG00000006252
N
0.746
MKI67IP
Tupaia belangeri
ENSTBEG00000001123
N
0.746
MKI67IP
Tetraodon nigroviridis
ENSTNIG00000017831
N
0.718
MKI67IP
Takifugu rubripes
ENSTRUG00000005206
N
0.704
MKI67IP
Tursiops truncatus
ENSTTRG00000005849
N
0.845
MKI67IP
Vicugna pacos
ENSVPAG00000005847
N
0.845
mki67ip
Xenopus tropicalis
ENSXETG00000000839
N
0.732
Q7SYS2
Xenopus laevis
Q7SYS2
N
0.704