HNRNPF (Sus scrofa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSSCG00000010203 T41466_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.833
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000010879 RRM 13 84
ENSSSCP00000010879 RRM 113 182
ENSSSCP00000010879 RRM 291 358

Links

Other RRM family RBPs
Other Sus scrofa RBPs

92 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH70969 Xenopus laevis AAH70969 I 0.805
AAH77770 Xenopus laevis AAH77770 I 0.814
AAI10708 Xenopus laevis AAI10708 I 0.814
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.990
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.862
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.838
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.829
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.838
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.976
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.862
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.862
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.990
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.838
ENSCHOG00000003841 Choloepus hoffmanni ENSCHOG00000003841 I 0.781
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.833
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.862
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.981
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.862
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.986
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.838
hnrnph1l Danio rerio ENSDARG00000005551 I 0.829
HNRNPH3 Danio rerio ENSDARG00000039466 I 0.719
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.971
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.862
LOC100050002 Equus caballus ENSECAG00000003229 I 0.981
LOC100067495 Equus caballus ENSECAG00000014429 I 0.781
LOC100057665 Equus caballus ENSECAG00000023575 I 0.838
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.838
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.848
HNRNPH1 Felis catus ENSFCAG00000001204 I 0.757
HNRNPF Felis catus ENSFCAG00000006794 N 0.771
HNRNPH2 Felis catus ENSFCAG00000015400 I 0.790
HNRNPH2 Homo sapiens ENSG00000126945 D 0.833
HNRNPH1 Homo sapiens ENSG00000169045 I 0.862
HNRNPF Homo sapiens ENSG00000169813 I 0.986
HNRNPH3 Gasterosteus aculeatus ENSGACG00000016118 I 0.719
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.814
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.862
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.833
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.986
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.862
HNRNPF Loxodonta africana ENSLAFG00000000424 I 0.962
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.871
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.862
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.986
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.948
HNRNPF Myotis lucifugus ENSMLUG00000007261 I 0.838
ENSMMUG00000017392 Macaca mulatta ENSMMUG00000017392 I 0.714
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.833
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.986
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.857
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.862
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.976
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.848
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.857
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.838
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.838
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.862
ENSOCUG00000024604 Oryctolagus cuniculus ENSOCUG00000024604 I 0.910
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.986
HNRNPH1 Otolemur garnettii ENSOGAG00000012631 I 0.757
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.986
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.838
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.795
HNRNPH3 Oryzias latipes ENSORLG00000010499 I 0.714
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.838
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.962
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.986
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.862
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.833
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.986
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.862
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.833
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.838
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.971
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.862
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.848
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.976
ENSRNOG00000015533 Rattus norvegicus ENSRNOG00000015533 I 0.843
HNRNPH1 Sorex araneus ENSSARG00000003024 I 0.771
HNRNPF Sorex araneus ENSSARG00000010059 I 0.981
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.838
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.862
HNRNPH1 Taeniopygia guttata ENSTGUG00000001085 I 0.776
HNRNPH3 Tetraodon nigroviridis ENSTNIG00000013788 I 0.733
HNRNPH1 Takifugu rubripes ENSTRUG00000001031 I 0.810
HNRNPH3 Takifugu rubripes ENSTRUG00000005350 I 0.724
HNRNPH1 Tarsius syrichta ENSTSYG00000006417 I 0.781
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.838
HNRNPH1 Tursiops truncatus ENSTTRG00000000470 I 0.762
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.838
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.819