CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSVIVG00027520001
(
Vitis vinifera
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
GSVIVG00027520001
T44740_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSVIVT00027520001
RRM
3
38
ISQPVAGFAFVYMDDERDAEDAIRRLDRTVFGRKGR
GSVIVT00027520001
RRM
70
133
LFVINFDPIHTRTRDLERHFDLYGKILNIRIRRNFAFIQFESQEDATKALDATNMSKFMDRVIS
Links
Other
RRM
family RBPs
Other
Vitis vinifera
RBPs
1 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
30147.m014308
Ricinus communis
30147.m014308
N
0.710