LOC_Os02g12850 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os02g12850 T44956_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os02g12850.1 RRM 68 136
LOC_Os02g12850.1 RRM 157 227

Links

Other RRM family RBPs
Other Oryza sativa RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE006177 Oryza indica BGIOSIBCE006177 N 0.986
BGIOSIBCE022335 Oryza indica BGIOSIBCE022335 N 0.886
BRADI1G37692 Brachypodium distachyon BRADI1G37692 N 0.886
BRADI3G08380 Brachypodium distachyon BRADI3G08380 N 0.929
cassava179.valid.m1 Manihot esculenta cassava179.valid.m1 N 0.721
GRMZM2G139090 Zea mays GRMZM2G139090 N 0.879
GRMZM2G139643 Zea mays GRMZM2G139643 N 0.936
GRMZM2G167356 Zea mays GRMZM2G167356 N 0.950
GRMZM2G550472 Zea mays GRMZM2G550472 N 0.886
GSVIVG00016872001 Vitis vinifera GSVIVG00016872001 N 0.721
MDP0000158246 Malus x domestica MDP0000158246 N 0.750
PDK_20s1385921g004 Phoenix dactylifera PDK_20s1385921g004 N 0.757
PDK_20s1535701g001 Phoenix dactylifera PDK_20s1535701g001 N 0.764
B9N2X8_POPTR Populus trichocarpa POPTR_0001s20310 N 0.736
B9MWT9_POPTR Populus trichocarpa POPTR_0003s04340 N 0.721
ppa006895m Prunus persica ppa006895m N 0.729
SB04G007860 Sorghum bicolor Sb04g007860 N 0.950
SB10G022380 Sorghum bicolor Sb10g022380 N 0.893