LOC_Os04g52200 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os04g52200 T45028_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g52200.1 RRM 25 94
LOC_Os04g52200.1 RRM 372 441
LOC_Os04g52200.1 RRM 564 628
LOC_Os04g52200.1 RRM 684 759
LOC_Os04g52200.1 RRM 783 851

Links

Other RRM family RBPs
Other Oryza sativa RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI5G21380 Brachypodium distachyon BRADI5G21380 N 0.932
cassava28560.m1 Manihot esculenta cassava28560.m1 N 0.735
Cucsa.107130 Cucumis sativus Cucsa.107130 N 0.701
GRMZM2G031529 Zea mays GRMZM2G031529 N 0.915