CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SB07G024400
(
Sorghum bicolor
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Sb07g024400
T46049_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb07g024400.1
RRM
116
186
VYVGNLPYDIDSEGLAQLFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEMFNRYDISGRLLN
Sb07g024400.1
RRM
210
280
AYVGNLPWQVDDSRLVQLFSEHGEVVNATVVYDRESGRSRGFGFVTMVSKEELDDAISALDGQELDGRPLR
Links
Other
RRM
family RBPs
Other
Sorghum bicolor
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A7THZ4_VANPO
Vanderwaltozyma polyspora
A7THZ4_VANPO
N
0.000
KLTH0E10868g
Kluyveromyces thermotolerans
KLTH0E10868g
N
0.000