SB07G024400 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb07g024400 T46049_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb07g024400.1 RRM 116 186
Sb07g024400.1 RRM 210 280

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30147.m013835 Ricinus communis 30147.m013835 N 0.711
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.711
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.944
BRADI3G42700 Brachypodium distachyon BRADI3G42700 N 0.944
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.852
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.718
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.732
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.704
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.732
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.718
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.711
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.725
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.704
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.845
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.937
GRMZM2G158462 Zea mays GRMZM2G158462 N 0.958
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.732
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.775
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.944
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.831
MDP0000218595 Malus x domestica MDP0000218595 N 0.768
MDP0000528470 Malus x domestica MDP0000528470 N 0.739
MDP0000919119 Malus x domestica MDP0000919119 N 0.768
mgf001484m Mimulus guttatus mgf001484m N 0.739
mgf008267m Mimulus guttatus mgf008267m N 0.718
mgf009747m Mimulus guttatus mgf009747m N 0.704
PK05280.1 Cannabis sativa PK05280.1 N 0.761
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.768
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.718
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.739
ppa008913m Prunus persica ppa008913m N 0.768
ppa009286m Prunus persica ppa009286m N 0.732
SB02G011330 Sorghum bicolor Sb02g011330 N 0.817
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.704