CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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EDI_110230
(
Entamoeba dispar
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
EDI_110230
T46585_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDI_110230
RRM
43
113
LFICKMNPITNEEDLEEIFRKYGKIRSVEIIRDRKTKKSLGYGFIEFETKEGCENAYQKMDNVIIDERRIH
Links
Other
RRM
family RBPs
Other
Entamoeba dispar
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL014030
Aedes aegypti
AAEL014030
N
0.000
AGAP007114
Anopheles gambiae
AGAP007114
N
0.000
amel4_ncbi_hmm20485
Apis mellifera
amel4_ncbi_hmm20485
N
0.000
Ame_R019935
Ailuropoda melanoleuca
Ame_R019935
N
0.000
CpipJ_CPIJ008431
Culex pipiens
CpipJ_CPIJ008431
N
0.000
DGIL_AUG5s17420g5t1
Acyrtosiphon pisum
DGIL_AUG5s17420g5t1
N
0.000
RC3H2
Bos taurus
ENSBTAG00000023867
N
0.000
RC3H2
Canis familiaris
ENSCAFG00000020250
N
0.000
RC3H2
Callithrix jacchus
ENSCJAG00000020050
N
0.000
RC3H2
Cavia porcellus
ENSCPOG00000008511
N
0.000
Rc3h2
Dipodomys ordii
ENSDORG00000006398
N
0.000
RC3H2
Equus caballus
ENSECAG00000022176
N
0.000
RC3H2
Homo sapiens
ENSG00000056586
N
0.000
RC3H2
Gallus gallus
ENSGALG00000001253
N
0.000
RC3H2
Gorilla gorilla
ENSGGOG00000017062
N
0.000
RC3H2
Loxodonta africana
ENSLAFG00000003521
N
0.000
RC3H2
Meleagris gallopavo
ENSMGAG00000007984
N
0.000
RC3H2
Myotis lucifugus
ENSMLUG00000013992
N
0.000
RC3H2
Macaca mulatta
ENSMMUG00000021134
N
0.000
RC3H2
Monodelphis domestica
ENSMODG00000019725
N
0.000
Rc3h2
Mus musculus
ENSMUSG00000075376
N
0.000
RC3H2
Ornithorhynchus anatinus
ENSOANG00000008194
N
0.000
RC3H2
Oryctolagus cuniculus
ENSOCUG00000008804
N
0.000
RC3H2
Otolemur garnettii
ENSOGAG00000010678
N
0.000
RC3H2
Ochotona princeps
ENSOPRG00000000135
N
0.000
RC3H2
Pan troglodytes
ENSPTRG00000021339
N
0.000
Rc3h2
Rattus norvegicus
ENSRNOG00000009196
N
0.000
RC3H2
Sorex araneus
ENSSARG00000012329
N
0.000
RC3H2
Sus scrofa
ENSSSCG00000005575
N
0.000
RC3H2
Spermophilus tridecemlineatus
ENSSTOG00000010655
N
0.000
RC3H2
Tupaia belangeri
ENSTBEG00000009622
N
0.000
RC3H2
Taeniopygia guttata
ENSTGUG00000006889
N
0.000
RC3H2
Tarsius syrichta
ENSTSYG00000000961
N
0.000
RC3H2
Tursiops truncatus
ENSTTRG00000016954
N
0.000
RC3H2
Vicugna pacos
ENSVPAG00000005994
N
0.000
roq
Drosophila melanogaster
FBgn0036621
N
0.000
GA14160-RA
Drosophila pseudoobscura
FBgn0074189
N
0.000
GF24386
Drosophila ananassae
FBgn0101380
N
0.000
GG13458
Drosophila erecta
FBgn0105730
N
0.000
GH15595
Drosophila grimshawi
FBgn0123066
N
0.000
GI16872
Drosophila mojavensis
FBgn0139618
N
0.000
GL18000
Drosophila persimilis
FBgn0155603
N
0.000
GM24408
Drosophila sechellia
FBgn0179271
N
0.000
GD12476
Drosophila simulans
FBgn0184205
N
0.000
GJ12622
Drosophila virilis
FBgn0199859
N
0.000
GK20807
Drosophila willistoni
FBgn0222803
N
0.000
GE22905
Drosophila yakuba
FBgn0240107
N
0.000
fgenesh2_pg.scaffold_20000167
Branchiostoma floridae
fgenesh2_pg.scaffold_20000167
N
0.000
gw1.3.272.1
Daphnia pulex
gw1.3.272.1
N
0.000
gw1.780.2.1
Capitella teleta
gw1.780.2.1
N
0.000
ISCW013176
Ixodes scapularis
ISCW013176
N
0.000
nasonia_NCBI_hmm328144
Nasonia vitripennis
nasonia_NCBI_hmm328144
N
0.000
PHUM537030
Pediculus humanus
PHUM537030
N
0.000
XP_001176931.1
Strongylocentrotus purpuratus
XP_001176931.1
N
0.000
XP_001178544.1
Strongylocentrotus purpuratus
XP_001178544.1
N
0.000