CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PBANKA_112820
(
Plasmodium berghei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PBANKA_112820
T47260_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PBANKA_112820
RRM
42
99
YILYCMFYEFSEDIIKIKLCKEKNSQKNSYAFIEFTNYDIAKYCFEQLNGKWIPGKIN
PBANKA_112820
RRM
133
204
IYVGSLPKSTTKEEIENLFSSFYSSICFVKIIKNTQKNQNKVYCFIHFFNYDECVRALTEMDGYIFKGYKIK
Links
Other
RRM
family RBPs
Other
Plasmodium berghei
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCHAS_112770
Plasmodium chabaudi
PCHAS_112770
N
0.992
PFF1425w
Plasmodium falciparum
PFF1425w
N
0.794
PKH_111950
Plasmodium knowlesi
PKH_111950
N
0.795
PVX_114570
Plasmodium vivax
PVX_114570
N
0.840
PY04169
Plasmodium yoelii
PY04169
N
1.000