CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
29736.m002048
(
Ricinus communis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
29736.m002048
T48681_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
29736.m002048
RRM
50
107
VVVMGLPPNCSVLDLKSRFEIYGEISRTRIDRDVALITFRTRDSAEAAIAAALDTSFG
Links
Other
RRM
family RBPs
Other
Ricinus communis
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GSVIVG00020080001
Vitis vinifera
GSVIVG00020080001
N
0.729
B9HMV5_POPTR
Populus trichocarpa
POPTR_0010s04350
N
0.729