estExt_fgenesh1_pm.C_320007 (Cochliobolus heterostrophus C5)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pm.C_320007 T50716_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_320007 RRM 15 82

Links

Other RRM family RBPs
Other Cochliobolus heterostrophus C5 RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB09506.1 Alternaria brassicicola AB09506.1 N 0.803
BC1G_07253 Botrytis cinerea BC1G_07253 N 0.868
BDBG_05422 Blastomyces dermatitidis BDBG_05422 N 0.897
ACLA_068370 Aspergillus clavatus CADACLAG00006893 N 0.882
AFLA_130110 Aspergillus flavus CADAFLAG00010069 N 0.882
An02g14330 Aspergillus niger CADANGAG00002959 N 0.882
ANIA_07456 Aspergillus nidulans CADANIAG00000549 N 0.882
AO090001000713 Aspergillus oryzae CADAORAG00000650 N 0.882
ATEG_06786 Aspergillus terreus CADATEAG00009636 N 0.882
NFIA_082680 Neosartorya fischeri CADNFIAG00008521 N 0.882
CHGG_01436 Chaetomium globosum CHGG_01436 N 0.868
CIMG_00993 Coccidioides immitis CIMG_00993 N 0.868
CPSG_02222 Coccidioides posadasii CPSG_02222 N 0.868
estExt_fgenesh1_pg.C_20441 Myceliophthora thermophila estExt_fgenesh1_pg.C_20441 N 0.853
estExt_fgenesh2_kg.C_270002 Neurospora tetrasperma estExt_fgenesh2_kg.C_270002 N 0.868
estExt_fgenesh2_kg.C_40138 Thielavia terrestris estExt_fgenesh2_kg.C_40138 N 0.868
estExt_fgenesh2_pg.C_40112 Neurospora discreta estExt_fgenesh2_pg.C_40112 N 0.868
estExt_Genewise1.C_10238 Trichoderma reesei estExt_Genewise1.C_10238 N 0.897
estExt_Genewise1.C_21367 Trichoderma virens estExt_Genewise1.C_21367 N 0.897
estExt_Genewise1.C_50824 Cryphonectria parasitica estExt_Genewise1.C_50824 N 0.838
estExt_Genewise1Plus.C_100598 Trichoderma atroviride estExt_Genewise1Plus.C_100598 N 0.912
estExt_Genewise1Plus.C_14054 Mycosphaerella fijiensis estExt_Genewise1Plus.C_14054 N 0.897
estExt_Genewise1Plus.C_chr_60999 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_60999 N 0.882
e_gw1.6.621.1 Sporobolomyces roseus e_gw1.6.621.1 N 0.706
fgenesh1_pg.sca_1_chr1_3_0000477 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000477 N 0.897
fgenesh1_pm.00082_#_90 Aspergillus carbonarius fgenesh1_pm.00082_#_90 N 0.882
FGSG_00536 Fusarium graminearum FGSG_00536 N 0.897
FOXG_00520 Fusarium oxysporum FOXG_00520 N 0.897
FVEG_00993 Fusarium verticillioides FVEG_00993 N 0.897
GLRG_04563 Colletotrichum graminicola GLRG_04563 N 0.882
GSTUMT00006858001 Tuber melanosporum GSTUMT00006858001 N 0.776
HCAG_03657 Histoplasma capsulatum HCAG_03657 N 0.897
MCYG_04660 Microsporum canis MCYG_04660 N 0.897
MGG_01579 Magnaporthe oryzae MGG_01579 N 0.897
MGYG_02003 Microsporum gypseum MGYG_02003 N 0.897
NCU02837 Neurospora crassa NCU02837 N 0.868
PABG_01240 Paracoccidioides brasiliensis PABG_01240 N 0.897
Pa_1_8040 Podospora anserina Pa_1_8040 N 0.868
Pc22g08360 Penicillium chrysogenum Pc22g08360 N 0.882
PMAA_028810 Penicillium marneffei PMAA_028810 N 0.897
PTRG_02020 Pyrenophora tritici repentis PTRG_02020 N 0.956
SS1G_09992 Sclerotinia sclerotiorum SS1G_09992 N 0.868
TEQG_02446 Trichophyton equinum TEQG_02446 N 0.897
TERG_03272 Trichophyton rubrum TERG_03272 N 0.897
TESG_02801 Trichophyton tonsurans TESG_02801 N 0.897
UREG_00940 Uncinocarpus reesii UREG_00940 N 0.882
VDAG_03069 Verticillium dahliae VDAG_03069 N 0.912
VDBG_05905 Verticillium albo atrum VDBG_05905 N 0.809