CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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0500010280
(
Ostreococcus tauri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
0500010280
T55074_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
0500010280
RRM
1591
1661
IYVGHVPHGFYETQMREYFGQFGDVTRVKVSRNKKTGRSKHYAFIEFKHPEVASIVAESMNNYLLANQVLK
Links
Other
RRM
family RBPs
Other
Ostreococcus tauri
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_Genewise1Plus.C_200094
Postia placenta
estExt_Genewise1Plus.C_200094
N
0.704
e_gw1.87.91.1
Postia placenta
e_gw1.87.91.1
N
0.704
gw1.3.766.1
Micromonas pusilla
gw1.3.766.1
N
0.704
gw1.5.1084.1
Ostreococcus RCC809
gw1.5.1084.1
N
0.930
gwEuk.5.447.1
Ostreococcus lucimarinus
gwEuk.5.447.1
N
0.930