An15g06390 (Aspergillus niger)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 CADANGAG00012318 T60189_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00012084 S1 164 214
CADANGAP00012084 S1 279 346
CADANGAP00012084 S1 469 519
CADANGAP00012084 S1 558 636
CADANGAP00012084 S1 654 725
CADANGAP00012084 S1 836 909
CADANGAP00012084 S1 1056 1131
CADANGAP00012084 S1 1141 1214
CADANGAP00012084 S1 1235 1308
CADANGAP00012084 S1 1324 1399

Links

Other S1 family RBPs
Other Aspergillus niger RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFLA_014760 Aspergillus flavus CADAFLAG00003361 N 0.817
AO090012000197 Aspergillus oryzae CADAORAG00005809 N 0.817
fgenesh1_pm.00815_#_48 Aspergillus carbonarius fgenesh1_pm.00815_#_48 N 0.915