CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
zcchc17
(
Xenopus tropicalis
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSXETG00000012917
T60600_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXETP00000028271
S1
4
80
LPELYDIFKGEVASVTDYGAFIKIPGCRRQGLVHKSHMSSSHVDRPSEVVDVGEKVWVKVIGRETKDGKEKVSLSMK
Links
Other
S1
family RBPs
Other
Xenopus tropicalis
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BGIOSIBCE016666
Oryza indica
BGIOSIBCE016666
N
0.000
PDK_20s1611671g001
Phoenix dactylifera
PDK_20s1611671g001
N
0.000