CBN00865 (Caenorhabditis brenneri)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		CBN00865 T00426_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CBN00865 CCCH ZF 21 47
CBN00865 RRM 89 150
CBN00865 CCCH ZF 159 184

Links

Other CCCH ZF,RRM family RBPs
Other Caenorhabditis brenneri RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g34630 Oryza sativa LOC_Os01g34630 N 0.000
LOC_Os05g49110 Oryza sativa LOC_Os05g49110 N 0.000
LOC_Os07g12840 Oryza sativa LOC_Os07g12840 N 0.000
LOC_Os07g23400 Oryza sativa LOC_Os07g23400 N 0.000
LOC_Os07g27510 Oryza sativa LOC_Os07g27510 N 0.000
LOC_Os08g17700 Oryza sativa LOC_Os08g17700 N 0.000
LOC_Os10g21730 Oryza sativa LOC_Os10g21730 N 0.000
LOC_Os12g06580 Oryza sativa LOC_Os12g06580 N 0.000
LOC_Os12g22820 Oryza sativa LOC_Os12g22820 N 0.000